BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023D02SP1|AL428037
(998 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1715 1964 0.0
>3x_Contig1715
Length = 16241
Score = 1964 bits (990), Expect = 0.0
Identities = 997/998 (99%), Gaps = 1/998 (0%)
Strand = Plus / Minus
Query: 1 tgatttatgtatgccttttctaataattagttagttagttgtcctttgtccactggaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10228 tgatttatgtatgccttttctaataattagttagttagttgtcctttgtccactggaatc 10169
Query: 61 tgccgtcgataagcaattcatagttagaagagaagtgctctttcttaccaagccaatccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10168 tgccgtcgataagcaattcatagttagaagagaagtgctctttcttaccaagccaatccc 10109
Query: 121 agctgtaactctctaaccaccaccatgaatgctcaaatcagtaacctagtcatcatgttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10108 agctgtaactctctaaccaccaccatgaatgctcaaatcagtaacctagtcatcatgttg 10049
Query: 181 atcatgatgcaagtatctcgtcgtttggatatggaggatccttcgatcgtgttgtacatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10048 atcatgatgcaagtatctcgtcgtttggatatggaggatccttcgatcgtgttgtacatc 9989
Query: 241 cgtatcgcttatgtcgcttctgttgccatcacttggtccatctaccaatacgctagagct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9988 cgtatcgcttatgtcgcttctgttgccatcacttggtccatctaccaatacgctagagct 9929
Query: 301 caaatcgttaagaagaacgatttggccactttgaaatacgtggctccagctaacccattg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9928 caaatcgttaagaagaacgatttggccactttgaaatacgtggctccagctaacccattg 9869
Query: 361 ggtggtcaaaccgagaaaaaattggaagtcactaccgttcgtgattacgatttacaacag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9868 ggtggtcaaaccgagaaaaaattggaagtcactaccgttcgtgattacgatttacaacag 9809
Query: 421 attgattctgccattaaatccatctacactggtttggctatgatgggtttcatgcatttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9808 attgattctgccattaaatccatctacactggtttggctatgatgggtttcatgcatttg 9749
Query: 481 tacatgaaatacaccaacccattgttcatgcaaaccatctcaccaatcaagtccgctttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9748 tacatgaaatacaccaacccattgttcatgcaaaccatctcaccaatcaagtccgctttg 9689
Query: 541 gaacataacgaagttcaaattcatttgttcggaaaaccagcttctggtgatttgaagaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9688 gaacataacgaagttcaaattcatttgttcggaaaaccagcttctggtgatttgaagaga 9629
Query: 601 cctttcaagactccatctttgttcggtggtgccggtggtgccagtgaaccaaagactgac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9628 cctttcaagactccatctttgttcggtggtgccggtggtgccagtgaaccaaagactgac 9569
Query: 661 aagaaatctatcgaaactgctgaaaaggctggtaacggtggtgtcaaagctgaataatcg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9568 aagaaatctatcgaaactgctgaaaaggctggtaacggtggtgtcaaagctgaataatcg 9509
Query: 721 ggacgcgcatcgttgcgttttccaatcatgtgttttcttcatccatctctcaccattctc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9508 ggacgcgcatcgttgcgttttccaatcatgtgttttcttcatccatctctcaccattctc 9449
Query: 781 ttataaataaacacgtatatatgtatataaatgtacatgcgtgtatgtatacaactatta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9448 ttataaataaacacgtatatatgtatataaatgtacatgcgtgtatgtatacaactatta 9389
Query: 841 agatacctcaataggatgttttatcgtagcttttgttcagtttctttcgtgtttaagtgt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9388 agatacctcaataggatgttttatcgtagcttttgttcagtttctttcgtgtttaagtgt 9329
Query: 901 taaattgtacacatagacttcgcactttatttgaaagaaacgtgaatattattctataaa 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9328 taaattgtacacatagacttcgcactttatttgaaagaaacgtgaatattattctataaa 9269
Query: 961 gatcagacccaacccyttaactgttactgatcgagccg 998
||||||||||||||| ||||||||||||||||||||||
Sbjct: 9268 gatcagacccaaccc-ttaactgttactgatcgagccg 9232
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7455
Number of Sequences: 1807
Number of extensions: 7455
Number of successful extensions: 64
Number of sequences better than 1.0e-20: 1
length of query: 998
length of database: 10,358,551
effective HSP length: 16
effective length of query: 982
effective length of database: 10,329,639
effective search space: 10143705498
effective search space used: 10143705498
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)